Variant Calling and Expression Analysis Gabriel Ortiz June 16, 2020 21:44 Call SNPs/variants using Geneious or FreeBayes and perform real-time filtering of tabular results with synchronized genome view. Calculate and compare expression levels on mapped RNA-seq data and visualize using PCA and volcano plots. Related articles Can I call SNPs on individual sequences aligned to a reference? Can Geneious Prime handle RNA-Seq data? NGS Pre-Processing and Analysis Molecular Cloning and Primer Design Geneious vs GenBank: Nomenclature and exporting of Geneious Prime files in GenBank format Comments 0 comments Please sign in to leave a comment.