Due to configuration changes on the EMBL-EBI end the InterProScan plugin for Geneious Prime is not currently working. The author of the plugin is working to resolve this issue.
In the meantime we suggest running your InterProScan search directly from on EMBL-EBI server by going to https://www.ebi.ac.uk/interpro/search/sequence/. Results can be downloaded in GFF format for import into Geneious.
We apologise for any inconvenience this causes.