I get about 20% through removing chimeric reads using USEARCH v8.1 before UCHIME runs into an unexpected error.
Caused by: com.biomatters.geneious.publicapi.plugin.DocumentOperationException: UCHIME failed with error code 3
Could you please send us a support ticket via the Contact Support option in Geneious (under the Help menu) with details of your data and reference database? If possible please attach your data to the ticket.
Please sign in to leave a comment.