I'm appending some special nucleotide sequences (containing gaps) into an alignment document.The new sequences are optimized sequences based on the originals but their bases are changed occasionally.
I need to build and display a COnsensus based on the optimized sequences but not on the original sequences. I managed to produce this Optimized Consensus sequence and append it to the Alignment document. The problem is with the initial Consensus sequence shown as first element of the view. It appears that it gets automatically modified using ALL sequences (original + the generated ones). That is different from my newly generated optimized Consensus sequence.
Is there any way to replace the original Consensus sequence Graph with mine that refers only some of the sequences shown on the screen?
I hope this makes it clear: s1 to s8 are original sequences, 10 to 17 are the ones generated in code along with Optimized Consensus.
As you could see, the default generated Consensus has a Y in position 18 while the optimized Consensus a T. The Generated consensus is correct in this instance while the default one is not and that's why I want to replace the default one with the generated one.
And I wish you a fast recovery from the recent natural events.
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